BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B07SP1|AL430494
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1553 0.0
>3x_Contig1664
Length = 15696
Score = 1553 bits (782), Expect = 0.0
Identities = 812/821 (98%), Gaps = 3/821 (0%)
Strand = Plus / Minus
Query: 141 taacatactaaacaaggtcaatgaagggaaaawaatttggggagaaagcacttggtcagt 200
||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 15690 taacagacgaaacaaggtcaatgaagggaaaataatttggggagaaagcacttggtcagt 15631
Query: 201 taaatatgagaacaaaacaaaagtggaacaagtgaccaataacggaacaatgttccagca 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15630 taaatatgagaacaaaacaaaagtggaacaagtgaccaataacggaacaatgttccagca 15571
Query: 261 gaagaacataaagttactgacaatggcgattttcttcatattgtgcaattctaaatcgtt 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15570 gaagaacataaagttactgacaatggcgattttcttcatattgtgcaattctaaatcgtt 15511
Query: 321 acgaacgtgattcaaacgatctaacattggtttttcccaagcgtacaatttgatggactt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15510 acgaacgtgattcaaacgatctaacattggtttttcccaagcgtacaatttgatggactt 15451
Query: 381 catactgttcaaaatttccgttactgttttaattctcttatccttatattgcatctg--g 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 15450 catactgttcaaaatttccgttactgttttaattctcttatccttatattgcatctgagg 15391
Query: 439 gtcttgaacaactttttataaagtctagtcatgtaactgttgataggaaccatgataaca 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15390 gtcttgaacaactttttataaagtctagtcatgtaactgttgataggaaccatgataaca 15331
Query: 499 atggaaacaagaccgccaattgtggcattccccaataaaacgtaaagtgaaattaaaaca 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15330 atggaaacaagaccgccaattgtggcattccccaataaaacgtaaagtgaaattaaaaca 15271
Query: 559 ccgatcaattgaattggcgaaccaactaagatctgagcgttttcaaaaaatctttgaatt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15270 ccgatcaattgaattggcgaaccaactaagatctgagcgttttcaaaaaatctttgaatt 15211
Query: 619 ctgataacatcaacagacattaaatttaatacatcaccgtttgccttatcctcacgagcc 678
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 15210 ctgataacatcaacagacatgaaatgtaatacatcaccgtttgccttatcctcacgagcc 15151
Query: 679 tctgcagataaacgcaaggatttctgataaaccaaagacattaaactaccacgaattttc 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15150 tctgcagataaacgcaaggatttctgataaaccaaagacattaaactaccacgaattttc 15091
Query: 739 aaacccgcttcaaagatgttgatgaagaattggttggaaatgatggtagaaagaatgctc 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15090 aaacccgcttcaaagatgttgatgaagaattggttggaaatgatggtagaaagaatgctc 15031
Query: 799 aacaggaataaaccaatggcaacaaagaatccattcaagataggaaggtcacgagaatca 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15030 aacaggaataaaccaatggcaacaaagaatccattcaagataggaaggtcacgagaatca 14971
Query: 859 ggattgaaaacttcgatgaattttctgaacaattgaggttggatgacagataataaactc 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14970 ggattgaaaacttcgatgaattttctgaacaattgaggttggatgacagataataaactc 14911
Query: 919 ctgg-aamctcatatgacatggcaattgcgattgtagggcc 958
|||| || |||||||||||||||||||||||||||||||||
Sbjct: 14910 ctggaaacctcatatgacatggcaattgcgattgtagggcc 14870
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8252
Number of Sequences: 1807
Number of extensions: 8252
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)